************************************************
* START TREE SEARCH USING MPI WITH 1 PROCESSES *
************************************************
Random seed of master = 117744
IQ-TREE MPI multicore version 1.5.5 for Linux 64-bit built May 30 2018
Copyright (c) 2011-2017 by Bui Quang Minh, Nguyen Lam Tung,
Olga Chernomor, Heiko Schmidt, and Arndt von Haeseler.

Host:    holygiribet06.rc.fas.harvard.edu (AVX, FMA3, 251 GB RAM)
Command: /n/helmod/apps/centos7/MPI/gcc/7.1.0-fasrc01/openmpi/2.1.0-fasrc02/iqtree/1.5.5-fasrc02/bin/iqtree-omp-mpi -nt 40 -st AA -ninit 10 -bb 1500 -pre 91taxa -msub nuclear -s ../../matrices/Concatenated_91taxa/91taxa_concatenated.phy -sp ../partition-iq_91taxa -m MFP+MERGE -rcluster 10 -madd LG4M,LG4X -mrate G,R,E
Seed:    117744 (Using SPRNG - Scalable Parallel Random Number Generator)
Time:    Wed Dec  1 18:44:34 2021
Kernel:  AVX+FMA - 40 threads (64 CPU cores detected)

Reading partition model file ../partition-iq_91taxa ...
Reading alignment file ../../matrices/Concatenated_91taxa/91taxa_concatenated.phy ... Phylip format detected
Alignment most likely contains protein sequences
WARNING: 4134 sites contain only gaps or ambiguous characters.
Alignment has 114 sequences with 30728 columns and 21494 patterns (11637 informative sites, 15342 constant sites)
                                                              Gap/Ambiguity  Composition  p-value
   1  Scolopocryptops_sexspinosus                                    51.56%    failed      4.46%
   2  Callipus_foetidissimus_SRR3485975                              45.14%    failed      2.32%
   3  Strigamia_maritima_1                                           50.73%    failed      4.19%
   4  Folsomia_isoSingle                                             47.10%    failed      0.06%
   5  Neogovea_matawai_MCZ133922                                     59.37%    failed      1.26%
   6  Glomeridella_minima_SRR3485983                                 46.82%    failed      1.48%
   7  Alipes_grandidieri                                             50.66%    failed      2.03%
   8  Polyxenidae_sp_2438_JEB_0005                                   57.04%    failed      0.32%
   9  Abacion_sp_MITS007                                             49.14%    passed      6.42%
  10  Anoplodactylus_insignis_IZ_134527_isoSingle                    48.58%    failed      0.00%
  11  Craspedosoma_sp_AD2016_SRR3485977                              42.55%    failed      0.57%
  12  Scutigera_coleoptrata_SRR1653237                               42.29%    failed      3.90%
  13  Abacion_magnum                                                 43.56%    failed      4.33%
  14  Himantarium_gabrielis                                          51.05%    failed      3.10%
  15  Scolopendra_cingulata_SRR1653235                               42.52%    failed      0.92%
  16  Eudigraphis_taiwanensis                                        53.42%    failed      0.23%
  17  Scolopocryptops_rubiginosus_SRR1653236                         41.39%    failed      4.90%
  18  Pauropus_huxleyi                                               55.38%    failed      0.42%
  19  Rhysida_longipes                                               57.01%    failed      2.13%
  20  Haploglomeris_multistriata_SRR3485985                          46.92%    failed      0.62%
  21  Andrognathus_corticarius                                       48.43%    failed      1.31%
  22  Scolopendra_subspinipes_SRR6377863                             43.43%    failed      0.19%
  23  Californiulus_sp                                               49.18%    failed      3.70%
  24  Notiphilides_grandis                                           51.96%    failed      3.33%
  25  Thrinaxoria_sp_M1                                              43.20%    failed      2.11%
  26  Lithobius_sp                                                   42.19%    failed      3.88%
  27  Centruroides_sculpturatus_IZ_46910_isoSingle                   50.86%    failed      0.31%
  28  Craterostigmus_tasmanianus                                     62.47%    failed      0.50%
  29  Scutigera_coleoptrata                                          58.43%    failed      3.87%
  30  Clinopodes_flavidus_SRR1653181                                 45.42%    failed      3.11%
  31  Hydroschendyla_submarina                                       61.89%    passed     15.37%
  32  Hanseniella_sp_AD2014_SRR1653195                               42.88%    failed      1.87%
  33  Siphonoconus                                                   47.41%    failed      0.04%
  34  Desmonus_earlei_MITS016                                        46.97%    failed      4.96%
  35  Strigamia_acuminata_SRR3485997                                 47.88%    failed      2.91%
  36  Lithobius_atkinsoni                                            57.13%    failed      3.51%
  37  Cryptops_hortensis                                             44.63%    failed      0.60%
  38  Cleidogona_sp                                                  41.48%    failed      0.20%
  39  Sigmoria_latior_munda                                          55.52%    failed      4.05%
  40  Henia_brevis                                                   53.46%    passed      6.11%
  41  Akymnopellis_chilensis                                         61.37%    passed     17.28%
  42  Craterostigmus_crabilli                                        46.33%    failed      3.43%
  43  Glomeridesmus_sp_1                                             43.70%    failed      0.38%
  44  Cylindroiulus_punctatus                                        53.56%    passed      5.84%
  45  Glomeridesmus_sp_2                                             43.06%    failed      0.26%
  46  Scoterpes_sp_AUMS15047                                         44.66%    failed      1.09%
  47  Sphendononema_guildingii                                       53.66%    passed      8.59%
  48  Tylobolus                                                      44.67%    passed      5.29%
  49  Narceus_americanus                                             47.23%    failed      2.41%
  50  Polyxenus_lagurus_SRR3485994                                   49.69%    failed      0.53%
  51  Polydesmus_complanatus_SRR3485993                              45.31%    failed      2.45%
  52  Onomeris_sp                                                    51.74%    failed      4.79%
  53  Cryptops_anomalans_SRR3485978                                  45.70%    failed      1.14%
  54  Ommatoiulus_sabulosus_SRR1653222                               45.09%    failed      2.18%
  55  Prostemmiulus_loomisi                                          49.51%    failed      1.65%
  56  Acopauropus_ornatus_SRR3485973                                 43.39%    failed      0.73%
  57  Calanus_finmarchicus_MCZ_IZ_60621_Crust123_TransD_Iso_Single   50.18%    failed      0.00%
  58  Symphylella_sp_AD2014_SRR1653241                               47.05%    failed      3.74%
  59  Theatops_spinicaudus                                           56.66%    passed      5.22%
  60  Striaria_sp_MITS013                                            42.12%    failed      0.33%
  61  Artemia_salina_MCZ_IZ_141349_Crust208_TransD_Iso_Single        46.69%    failed      0.21%
  62  Sphaerotheriidae_sp                                            58.64%    failed      1.83%
  63  Idotea_baltica_MCZ_IZ_71215                                    48.67%    failed      0.00%
  64  Orthoporus_sp_2                                                41.87%    failed      1.56%
  65  Orthoporus_sp_1                                                45.69%    failed      2.15%
  66  Mimops_orientalis_2_WG05101                                    77.05%    failed      0.01%
  67  Mimops_orientalis_2_WG05102                                    56.46%    failed      0.57%
  68  Eudigraphis_takakuwai_SRR1653191                               46.83%    failed      0.00%
  69  Scutigerina_weberi                                             55.21%    failed      1.68%
  70  Prostemmiulus_sp                                               58.90%    passed      5.28%
  71  Scutigerella                                                   62.85%    failed      3.17%
  72  Anadenobolus_sp                                                41.74%    failed      1.20%
  73  Tygarrup_javanicus                                             48.72%    failed      3.16%
  74  Orinisobates_nigrior                                           47.16%    failed      4.20%
  75  Siphonophorus_sp_1                                             89.07%    failed      0.01%
  76  Hanseniella                                                    50.34%    passed      8.75%
  77  Petaserpes_sp                                                  46.55%    failed      0.29%
  78  Craterostigmus_tasmanianus_SRR2774008                          44.41%    failed      1.00%
  79  Floridobolus_sp                                                51.43%    passed      6.33%
  80  Scolopendropsis_bahiensis                                      51.34%    failed      1.05%
  81  Rhinotus_purpureus                                             45.62%    failed      0.03%
  82  Paralamyctes_validus                                           52.25%    passed      7.15%
  83  Cyrtodesmus_sp                                                 44.58%    failed      1.06%
  84  Schendyla_carniolensis_SRR3485996                              43.72%    failed      3.36%
  85  Uroblaniulus_sp                                                47.36%    failed      3.88%
  86  Pseudopolydesmus_sp                                            41.50%    failed      1.28%
  87  Hanseniella_nivea_SRR3485984                                   43.21%    failed      0.65%
  88  Symphyla_japan                                                 59.37%    failed      2.50%
  89  Brachycybe_lecontii                                            41.32%    failed      0.36%
  90  Xystodesmidae_sp_AUMS5334                                      43.14%    failed      2.09%
  91  Platydesmus_sp                                                 44.26%    failed      0.39%
  92  Cambala_annulata                                               43.19%    passed      5.86%
  93  Stenotaenia_linearis                                           53.90%    failed      2.67%
  94  Strigamia_maritima_2                                           50.12%    failed      2.56%
  95  Himantarium_gabrielis_SRR1653198                               44.25%    failed      1.75%
  96  Microspirobolus_sp                                             64.29%    failed      0.03%
  97  Henia_illyrica_SRR3485986                                      46.16%    failed      1.48%
  98  Polydesmus_angustus                                            63.30%    failed      1.84%
  99  Asiomorpha_coarctata                                           54.92%    failed      0.07%
 100  Eupolybothrus_tridentinus_SRR3485982                           43.93%    failed      2.16%
 101  Mecistocephalus_guildingii                                     55.35%    failed      3.23%
 102  Glomeris_marginata                                             59.91%    failed      0.57%
 103  Anopsobius_giribeti                                            52.86%    passed      5.78%
 104  Pseudocellus_sp_iz140060                                       76.26%    failed      0.70%
 105  Eupolybothrus_cavernicolus_ERR338470                           44.12%    failed      2.59%
 106  Newportia_adisi                                                52.12%    failed      1.96%
 107  Limulus_polyphemus_isoSingle                                   54.09%    failed      0.00%
 108  Eupolybothrus_fasciatus_SRR3485981                             46.92%    failed      0.85%
 109  Polyzonium_germanicum_SRR3485995                               49.99%    failed      0.21%
 110  Chondromorpha_cairoensis                                       87.04%    failed      0.00%
 111  Cyliosoma                                                      85.07%    failed      0.00%
 112  Thalassisobates_littoralis_SRR1653242                          82.59%    failed      0.00%
 113  Xibalbanus_tulumensis                                          89.13%    failed      0.00%
 114  Trichomorpha_sp                                                84.91%    failed      0.00%
WARNING: 51 sequences contain more than 50% gaps/ambiguity
****  TOTAL                                                          51.77%  100 sequences failed composition chi2 test (p-value<5%; df=19)

Partition file is not in NEXUS format, assuming RAxML-style partition file...
Reading partition OG11343_gene1 (model=AA+MERGE, seq=AA, pos=1-402) ...
93 sequences and 402 sites extracted
Reading partition OG13379_gene2 (model=AA+MERGE, seq=AA, pos=403-811) ...
97 sequences and 409 sites extracted
Reading partition OG13430_gene3 (model=AA+MERGE, seq=AA, pos=812-1153) ...
92 sequences and 342 sites extracted
Reading partition OG14144_gene4 (model=AA+MERGE, seq=AA, pos=1154-1503) ...
92 sequences and 350 sites extracted
Reading partition OG14237_gene5 (model=AA+MERGE, seq=AA, pos=1504-1838) ...
93 sequences and 335 sites extracted
Reading partition OG14246_gene6 (model=AA+MERGE, seq=AA, pos=1839-2189) ...
92 sequences and 351 sites extracted
Reading partition OG14378_gene7 (model=AA+MERGE, seq=AA, pos=2190-2539) ...
94 sequences and 350 sites extracted
Reading partition OG14765_gene8 (model=AA+MERGE, seq=AA, pos=2540-2868) ...
106 sequences and 329 sites extracted
Reading partition OG15313_gene9 (model=AA+MERGE, seq=AA, pos=2869-3291) ...
97 sequences and 423 sites extracted
Reading partition OG1606_gene10 (model=AA+MERGE, seq=AA, pos=3292-4155) ...
97 sequences and 864 sites extracted
Reading partition OG16187_gene11 (model=AA+MERGE, seq=AA, pos=4156-4559) ...
92 sequences and 404 sites extracted
Reading partition OG16935_gene12 (model=AA+MERGE, seq=AA, pos=4560-4894) ...
94 sequences and 335 sites extracted
Reading partition OG17642_gene13 (model=AA+MERGE, seq=AA, pos=4895-5265) ...
96 sequences and 371 sites extracted
Reading partition OG18026_gene14 (model=AA+MERGE, seq=AA, pos=5266-5578) ...
93 sequences and 313 sites extracted
Reading partition OG19096_gene15 (model=AA+MERGE, seq=AA, pos=5579-5873) ...
97 sequences and 295 sites extracted
Reading partition OG20410_gene16 (model=AA+MERGE, seq=AA, pos=5874-6227) ...
91 sequences and 354 sites extracted
Reading partition OG20899_gene17 (model=AA+MERGE, seq=AA, pos=6228-6537) ...
97 sequences and 310 sites extracted
Reading partition OG21069_gene18 (model=AA+MERGE, seq=AA, pos=6538-6799) ...
99 sequences and 262 sites extracted
Reading partition OG21588_gene19 (model=AA+MERGE, seq=AA, pos=6800-7156) ...
94 sequences and 357 sites extracted
Reading partition OG22599_gene20 (model=AA+MERGE, seq=AA, pos=7157-7497) ...
92 sequences and 341 sites extracted
Reading partition OG23070_gene21 (model=AA+MERGE, seq=AA, pos=7498-7776) ...
92 sequences and 279 sites extracted
Reading partition OG23218_gene22 (model=AA+MERGE, seq=AA, pos=7777-8050) ...
98 sequences and 274 sites extracted
Reading partition OG23844_gene23 (model=AA+MERGE, seq=AA, pos=8051-8311) ...
93 sequences and 261 sites extracted
Reading partition OG24557_gene24 (model=AA+MERGE, seq=AA, pos=8312-8567) ...
92 sequences and 256 sites extracted
Reading partition OG24758_gene25 (model=AA+MERGE, seq=AA, pos=8568-8841) ...
92 sequences and 274 sites extracted
Reading partition OG26154_gene26 (model=AA+MERGE, seq=AA, pos=8842-9088) ...
95 sequences and 247 sites extracted
Reading partition OG26897_gene27 (model=AA+MERGE, seq=AA, pos=9089-9358) ...
97 sequences and 270 sites extracted
Reading partition OG27285_gene28 (model=AA+MERGE, seq=AA, pos=9359-9659) ...
99 sequences and 301 sites extracted
Reading partition OG27654_gene29 (model=AA+MERGE, seq=AA, pos=9660-9910) ...
101 sequences and 251 sites extracted
Reading partition OG28720_gene30 (model=AA+MERGE, seq=AA, pos=9911-10184) ...
92 sequences and 274 sites extracted
Reading partition OG29085_gene31 (model=AA+MERGE, seq=AA, pos=10185-10410) ...
92 sequences and 226 sites extracted
Reading partition OG30488_gene32 (model=AA+MERGE, seq=AA, pos=10411-10699) ...
93 sequences and 289 sites extracted
Reading partition OG30636_gene33 (model=AA+MERGE, seq=AA, pos=10700-10948) ...
94 sequences and 249 sites extracted
Reading partition OG30751_gene34 (model=AA+MERGE, seq=AA, pos=10949-11214) ...
92 sequences and 266 sites extracted
Reading partition OG31092_gene35 (model=AA+MERGE, seq=AA, pos=11215-11469) ...
94 sequences and 255 sites extracted
Reading partition OG33293_gene36 (model=AA+MERGE, seq=AA, pos=11470-11698) ...
95 sequences and 229 sites extracted
Reading partition OG33416_gene37 (model=AA+MERGE, seq=AA, pos=11699-11953) ...
96 sequences and 255 sites extracted
Reading partition OG34217_gene38 (model=AA+MERGE, seq=AA, pos=11954-12172) ...
93 sequences and 219 sites extracted
Reading partition OG3602_gene39 (model=AA+MERGE, seq=AA, pos=12173-12839) ...
93 sequences and 667 sites extracted
Reading partition OG37214_gene40 (model=AA+MERGE, seq=AA, pos=12840-13044) ...
97 sequences and 205 sites extracted
Reading partition OG37498_gene41 (model=AA+MERGE, seq=AA, pos=13045-13263) ...
93 sequences and 219 sites extracted
Reading partition OG37854_gene42 (model=AA+MERGE, seq=AA, pos=13264-13462) ...
93 sequences and 199 sites extracted
Reading partition OG38447_gene43 (model=AA+MERGE, seq=AA, pos=13463-13656) ...
91 sequences and 194 sites extracted
Reading partition OG38763_gene44 (model=AA+MERGE, seq=AA, pos=13657-13870) ...
91 sequences and 214 sites extracted
Reading partition OG38990_gene45 (model=AA+MERGE, seq=AA, pos=13871-14057) ...
94 sequences and 187 sites extracted
Reading partition OG39177_gene46 (model=AA+MERGE, seq=AA, pos=14058-14255) ...
95 sequences and 198 sites extracted
Reading partition OG39997_gene47 (model=AA+MERGE, seq=AA, pos=14256-14479) ...
91 sequences and 224 sites extracted
Reading partition OG40685_gene48 (model=AA+MERGE, seq=AA, pos=14480-14680) ...
99 sequences and 201 sites extracted
Reading partition OG41228_gene49 (model=AA+MERGE, seq=AA, pos=14681-14946) ...
91 sequences and 266 sites extracted
Reading partition OG41645_gene50 (model=AA+MERGE, seq=AA, pos=14947-15137) ...
93 sequences and 191 sites extracted
Reading partition OG42255_gene51 (model=AA+MERGE, seq=AA, pos=15138-15348) ...
92 sequences and 211 sites extracted
Reading partition OG42741_gene52 (model=AA+MERGE, seq=AA, pos=15349-15545) ...
92 sequences and 197 sites extracted
Reading partition OG4366_gene53 (model=AA+MERGE, seq=AA, pos=15546-16208) ...
91 sequences and 663 sites extracted
Reading partition OG43703_gene54 (model=AA+MERGE, seq=AA, pos=16209-16388) ...
92 sequences and 180 sites extracted
Reading partition OG45115_gene55 (model=AA+MERGE, seq=AA, pos=16389-16600) ...
93 sequences and 212 sites extracted
Reading partition OG45290_gene56 (model=AA+MERGE, seq=AA, pos=16601-16783) ...
105 sequences and 183 sites extracted
Reading partition OG45588_gene57 (model=AA+MERGE, seq=AA, pos=16784-16951) ...
92 sequences and 168 sites extracted
Reading partition OG4755_gene58 (model=AA+MERGE, seq=AA, pos=16952-17577) ...
96 sequences and 626 sites extracted
Reading partition OG47996_gene59 (model=AA+MERGE, seq=AA, pos=17578-17752) ...
93 sequences and 175 sites extracted
Reading partition OG48891_gene60 (model=AA+MERGE, seq=AA, pos=17753-17914) ...
91 sequences and 162 sites extracted
Reading partition OG5025_gene61 (model=AA+MERGE, seq=AA, pos=17915-18466) ...
94 sequences and 552 sites extracted
Reading partition OG52393_gene62 (model=AA+MERGE, seq=AA, pos=18467-18602) ...
92 sequences and 136 sites extracted
Reading partition OG53892_gene63 (model=AA+MERGE, seq=AA, pos=18603-18747) ...
91 sequences and 145 sites extracted
Reading partition OG5422_gene64 (model=AA+MERGE, seq=AA, pos=18748-19332) ...
95 sequences and 585 sites extracted
Reading partition OG5486_gene65 (model=AA+MERGE, seq=AA, pos=19333-19886) ...
91 sequences and 554 sites extracted
Reading partition OG55427_gene66 (model=AA+MERGE, seq=AA, pos=19887-20037) ...
100 sequences and 151 sites extracted
Reading partition OG55484_gene67 (model=AA+MERGE, seq=AA, pos=20038-20203) ...
103 sequences and 166 sites extracted
Reading partition OG55688_gene68 (model=AA+MERGE, seq=AA, pos=20204-20364) ...
93 sequences and 161 sites extracted
Reading partition OG59315_gene69 (model=AA+MERGE, seq=AA, pos=20365-20505) ...
92 sequences and 141 sites extracted
Reading partition OG59959_gene70 (model=AA+MERGE, seq=AA, pos=20506-20645) ...
94 sequences and 140 sites extracted
Reading partition OG60357_gene71 (model=AA+MERGE, seq=AA, pos=20646-20781) ...
92 sequences and 136 sites extracted
Reading partition OG6111_gene72 (model=AA+MERGE, seq=AA, pos=20782-21386) ...
103 sequences and 605 sites extracted
Reading partition OG62090_gene73 (model=AA+MERGE, seq=AA, pos=21387-21528) ...
104 sequences and 142 sites extracted
Reading partition OG6270_gene74 (model=AA+MERGE, seq=AA, pos=21529-22043) ...
93 sequences and 515 sites extracted
Reading partition OG6360_gene75 (model=AA+MERGE, seq=AA, pos=22044-22543) ...
91 sequences and 500 sites extracted
Reading partition OG64051_gene76 (model=AA+MERGE, seq=AA, pos=22544-22691) ...
92 sequences and 148 sites extracted
Reading partition OG64269_gene77 (model=AA+MERGE, seq=AA, pos=22692-22823) ...
95 sequences and 132 sites extracted
Reading partition OG65446_gene78 (model=AA+MERGE, seq=AA, pos=22824-22952) ...
93 sequences and 129 sites extracted
Reading partition OG65919_gene79 (model=AA+MERGE, seq=AA, pos=22953-23117) ...
91 sequences and 165 sites extracted
Reading partition OG67255_gene80 (model=AA+MERGE, seq=AA, pos=23118-23247) ...
91 sequences and 130 sites extracted
Reading partition OG6756_gene81 (model=AA+MERGE, seq=AA, pos=23248-23808) ...
94 sequences and 561 sites extracted
Reading partition OG68005_gene82 (model=AA+MERGE, seq=AA, pos=23809-23923) ...
92 sequences and 115 sites extracted
Reading partition OG6922_gene83 (model=AA+MERGE, seq=AA, pos=23924-24418) ...
91 sequences and 495 sites extracted
Reading partition OG69356_gene84 (model=AA+MERGE, seq=AA, pos=24419-24570) ...
95 sequences and 152 sites extracted
Reading partition OG7138_gene85 (model=AA+MERGE, seq=AA, pos=24571-25065) ...
93 sequences and 495 sites extracted
Reading partition OG72036_gene86 (model=AA+MERGE, seq=AA, pos=25066-25197) ...
94 sequences and 132 sites extracted
Reading partition OG73717_gene87 (model=AA+MERGE, seq=AA, pos=25198-25328) ...
92 sequences and 131 sites extracted
Reading partition OG7638_gene88 (model=AA+MERGE, seq=AA, pos=25329-25914) ...
96 sequences and 586 sites extracted
Reading partition OG77410_gene89 (model=AA+MERGE, seq=AA, pos=25915-26038) ...
92 sequences and 124 sites extracted
Reading partition OG7839_gene90 (model=AA+MERGE, seq=AA, pos=26039-26499) ...
95 sequences and 461 sites extracted
Reading partition OG7874_gene91 (model=AA+MERGE, seq=AA, pos=26500-27125) ...
93 sequences and 626 sites extracted
Reading partition OG79411_gene92 (model=AA+MERGE, seq=AA, pos=27126-27249) ...
92 sequences and 124 sites extracted
Reading partition OG8191_gene93 (model=AA+MERGE, seq=AA, pos=27250-27737) ...
92 sequences and 488 sites extracted
Reading partition OG8214_gene94 (model=AA+MERGE, seq=AA, pos=27738-28198) ...
91 sequences and 461 sites extracted
Reading partition OG8249_gene95 (model=AA+MERGE, seq=AA, pos=28199-28646) ...
97 sequences and 448 sites extracted
Reading partition OG8312_gene96 (model=AA+MERGE, seq=AA, pos=28647-29113) ...
92 sequences and 467 sites extracted
Reading partition OG8384_gene97 (model=AA+MERGE, seq=AA, pos=29114-29576) ...
92 sequences and 463 sites extracted
Reading partition OG83862_gene98 (model=AA+MERGE, seq=AA, pos=29577-29688) ...
91 sequences and 112 sites extracted
Reading partition OG85403_gene99 (model=AA+MERGE, seq=AA, pos=29689-29809) ...
102 sequences and 121 sites extracted
Reading partition OG8930_gene100 (model=AA+MERGE, seq=AA, pos=29810-30296) ...
94 sequences and 487 sites extracted
Reading partition OG9724_gene101 (model=AA+MERGE, seq=AA, pos=30297-30728) ...
93 sequences and 432 sites extracted
Degree of missing data: 0.174
Info: multi-threading strategy over partitions

WARNING: Q, E, I, L, F, P are not present in partition OG11343_gene1 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG13430_gene3 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG14144_gene4 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG14237_gene5 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG14246_gene6 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG14378_gene7 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG14765_gene8 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG1606_gene10 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG16935_gene12 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG17642_gene13 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG18026_gene14 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG19096_gene15 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG20899_gene17 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG21069_gene18 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG23070_gene21 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG23218_gene22 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG23844_gene23 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG24557_gene24 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG24758_gene25 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG26154_gene26 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG26897_gene27 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG27654_gene29 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG29085_gene31 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG30636_gene33 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG30751_gene34 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG31092_gene35 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG33293_gene36 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG34217_gene38 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG3602_gene39 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG37214_gene40 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG37498_gene41 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG37854_gene42 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG38447_gene43 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG38763_gene44 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG38990_gene45 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG39177_gene46 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG40685_gene48 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG41645_gene50 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG42741_gene52 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG43703_gene54 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG45290_gene56 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG45588_gene57 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG4755_gene58 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG47996_gene59 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG48891_gene60 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG5025_gene61 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG52393_gene62 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG53892_gene63 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG5422_gene64 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG5486_gene65 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG55427_gene66 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG55484_gene67 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG55688_gene68 that may cause numerical problems
WARNING: Q, E, I, L, F, P, W are not present in partition OG59315_gene69 that may cause numerical problems
WARNING: Q, E, I, L, F, P, W are not present in partition OG59959_gene70 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG60357_gene71 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG62090_gene73 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG6270_gene74 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG6360_gene75 that may cause numerical problems
WARNING: Q, E, I, L, F, P, W are not present in partition OG64051_gene76 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG64269_gene77 that may cause numerical problems
WARNING: Q, E, I, L, F, P, W are not present in partition OG65446_gene78 that may cause numerical problems
WARNING: Q, E, I, L, F, P, W are not present in partition OG65919_gene79 that may cause numerical problems
WARNING: Q, E, I, L, F, P, W are not present in partition OG67255_gene80 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG68005_gene82 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG6922_gene83 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG7138_gene85 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG72036_gene86 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG73717_gene87 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG77410_gene89 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG7839_gene90 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG79411_gene92 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG8191_gene93 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG8214_gene94 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG8249_gene95 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG8312_gene96 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG8384_gene97 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG83862_gene98 that may cause numerical problems
WARNING: Q, E, I, L, F, P, W are not present in partition OG85403_gene99 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG8930_gene100 that may cause numerical problems
WARNING: Q, E, I, L, F, P are not present in partition OG9724_gene101 that may cause numerical problems
WARNING: 493 states (see above) are not present that may cause numerical problems


Create initial parsimony tree by phylogenetic likelihood library (PLL)... 2.220 seconds

NOTE: ModelFinder requires 3732 MB RAM!
Selecting individual models for 101 charsets using BIC...
 No. Model        Score       Charset
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
   1 JTTDCMut+F+R4 18968.378   OG16935_gene12
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
   2 LG+F+G4      16202.720   OG11343_gene1
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
   3 LG+F+G4      13300.853   OG21588_gene19
   4 LG+F+R4      11482.355   OG8384_gene97
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
   5 LG+F+R3      6652.440    OG6756_gene81
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
   6 LG+F+R5      15833.647   OG17642_gene13
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
   7 LG+F+G4      14808.549   OG19096_gene15
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
   8 LG+F+R4      16367.903   OG14144_gene4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
   9 JTTDCMut+F+G4 18735.006   OG13379_gene2
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
  10 LG+F+R4      17828.318   OG13430_gene3	0h:22m:27s (41h:10m:21s left)
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  11 LG+F+G4      15492.820   OG20899_gene17	0h:22m:57s (38h:13m:29s left)
  12 JTT+F+G4     20404.226   OG7839_gene90	0h:23m:14s (35h:26m:28s left)
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  13 LG+F+R4      16669.385   OG5025_gene61	0h:23m:18s (32h:46m:32s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
  14 JTTDCMut+F+G4 19650.932   OG8312_gene96	0h:23m:54s (31h:12m:14s left)
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
  15 LG+F+R5      16804.565   OG14378_gene7	0h:24m:9s (29h:24m:9s left)
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  16 LG+F+R4      16673.073   OG16187_gene11	0h:24m:30s (27h:55m:55s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  17 JTT+F+G4     15437.332   OG28720_gene30	0h:25m:1s (26h:49m:4s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  18 LG+F+R4      19673.335   OG6922_gene83	0h:25m:53s (26h:11m:2s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  19 JTTDCMut+F+R5 18956.060   OG15313_gene9	0h:26m:24s (25h:16m:2s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  20 LG+F+G4      16512.690   OG26897_gene27	0h:27m:41s (25h:9m:32s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  21 LG+F+R5      29999.520   OG9724_gene101	0h:28m:4s (24h:16m:11s left)
  22 LG+F+R3      9916.834    OG14237_gene5	0h:28m:9s (23h:12m:52s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  23 JTT+F+R3     7360.174    OG14765_gene8	0h:28m:51s (22h:43m:44s left)
  24 JTT+F+G4     15392.001   OG27285_gene28	0h:28m:54s (21h:48m:4s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  25 LG+F+R5      10632.625   OG14246_gene6	0h:30m:38s (22h:9m:38s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
  26 LG+F+G4      16485.240   OG27654_gene29	0h:31m:52s (22h:9m:14s left)
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  27 LG+F+R4      21613.816   OG4755_gene58	0h:32m:21s (21h:37m:49s left)
  28 LG+F+R4      10841.243   OG21069_gene18	0h:32m:36s (20h:59m:45s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  29 LG+F+G4      11166.820   OG33416_gene37	0h:33m:18s (20h:41m:31s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  30 LG+F+R5      10854.387   OG24557_gene24	0h:33m:45s (20h:15m:3s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  31 LG+F+G4      24561.080   OG6360_gene75	0h:34m:58s (20h:17m:18s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  32 LG+F+R4      7528.153    OG23218_gene22	0h:35m:17s (19h:49m:1s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  33 LG+F+R4      10885.472   OG37214_gene40	0h:36m:4s (19h:37m:21s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
  34 JTTDCMut+F+R4 9867.183    OG23070_gene21	0h:37m:45s (19h:54m:51s left)
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  35 JTTDCMut+F+R4 7817.442    OG22599_gene20	0h:37m:56s (19h:25m:6s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  36 LG+F+G4      6986.446    OG26154_gene26	0h:38m:47s (19h:17m:8s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  37 LG+F+G4      15987.749   OG42741_gene52	0h:39m:34s (19h:7m:35s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  38 JTT+F+G4     9423.127    OG69356_gene84	0h:39m:55s (18h:46m:18s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  39 LG+F+G4      11167.321   OG38763_gene44	0h:40m:20s (18h:28m:2s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
  40 LG+F+R4      10781.459   OG38447_gene43	0h:40m:25s (18h:1m:16s left)
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
  41 JTTDCMut+F+R3 6590.931    OG24758_gene25	0h:40m:39s (17h:40m:15s left)
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  42 LG+F+R4      12092.608   OG23844_gene23	0h:40m:52s (17h:19m:34s left)
  43 LG+F+G4      12319.855   OG29085_gene31	0h:41m:2s (16h:58m:22s left)
  44 LG+F+R4      16755.858   OG8249_gene95	0h:41m:6s (16h:36m:3s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
  45 JTT+F+G4     13797.727   OG45115_gene55	0h:41m:27s (16h:20m:59s left)
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  46 LG+F+G4      6730.454    OG45290_gene56	0h:41m:34s (16h:1m:39s left)
  47 LG+F+G4      5812.377    OG39177_gene46	0h:41m:36s (15h:41m:4s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
  48 JTTDCMut+F+G4 5990.346    OG38990_gene45	0h:42m:0s (15h:29m:17s left)
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
  49 LG+F+R5      11931.075   OG18026_gene14	0h:42m:33s (15h:21m:41s left)
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  50 LG+F+G4      9933.381    OG43703_gene54	0h:42m:58s (15h:11m:1s left)
  51 LG+F+R5      18357.790   OG34217_gene38	0h:42m:59s (14h:52m:48s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  52 LG+F+G4      18952.494   OG41645_gene50	0h:43m:23s (14h:42m:54s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  53 JTTDCMut+F+G4 5883.035    OG30636_gene33	0h:43m:40s (14h:30m:52s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
  54 LG+F+G4      9159.240    OG33293_gene36	0h:43m:54s (14h:18m:48s left)
  55 LG+F+R6      17093.148   OG5422_gene64	0h:43m:55s (14h:2m:40s left)
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  56 LG+F+R4      5450.757    OG37498_gene41	0h:44m:20s (13h:54m:36s left)
  57 LG+F+R5      26186.968   OG20410_gene16	0h:44m:21s (13h:39m:25s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  58 LG+F+G4      6303.821    OG62090_gene73	0h:45m:12s (13h:40m:2s left)
  59 LG+F+G4      3604.002    OG37854_gene42	0h:45m:22s (13h:28m:21s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  60 JTTDCMut+F+G4 2389.016    OG45588_gene57	0h:46m:10s (13h:28m:7s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  61 LG+F+R4      5883.296    OG83862_gene98	0h:46m:42s (13h:23m:22s left)
  62 JTTDCMut+F+G4 5177.943    OG79411_gene92	0h:46m:47s (13h:10m:49s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  63 JTTDCMut+F+R4 16613.134   OG39997_gene47	0h:47m:10s (13h:3m:55s left)
  64 Dayhoff+F+G4 2982.544    OG60357_gene71	0h:47m:12s (12h:51m:39s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
  65 LG+F+G4      5804.333    OG47996_gene59	0h:47m:20s (12h:41m:10s left)
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
  66 LG+F+G4      8610.513    OG68005_gene82	0h:47m:25s (12h:30m:16s left)
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  67 JTTDCMut+F+R4 3743.575    OG67255_gene80	0h:47m:29s (12h:19m:15s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
  68 LG+F+G4      10000.029   OG77410_gene89	0h:47m:34s (12h:8m:55s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  69 LG+F+G4      7134.554    OG64269_gene77	0h:47m:43s (12h:0m:5s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
  70 VT+F         1659.021    OG64051_gene76	0h:47m:49s (11h:50m:36s left)
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  71 LG+F+G4      4890.065    OG40685_gene48	0h:47m:56s (11h:41m:37s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
  72 JTTDCMut+F+R2 2830.208    OG85403_gene99	0h:48m:4s (11h:32m:57s left)
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  73 LG+F+R5      22483.023   OG8930_gene100	0h:48m:32s (11h:29m:27s left)
  74 Dayhoff+F+R3 4368.857    OG42255_gene51	0h:48m:40s (11h:21m:32s left)
  75 LG+F+R5      23015.099   OG8191_gene93	0h:48m:52s (11h:14m:24s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  76 LG+F+R4      6478.644    OG53892_gene63	0h:49m:30s (11h:13m:38s left)
  77 JTTDCMut+F+G4 3901.774    OG65446_gene78	0h:49m:41s (11h:6m:43s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  78 LG+F+R3      2063.864    OG52393_gene62	0h:50m:27s (11h:7m:30s left)
  79 JTTDCMut+F+G4 5637.564    OG59315_gene69	0h:50m:33s (10h:59m:44s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
  80 LG+F+G4      5425.066    OG73717_gene87	0h:50m:44s (10h:53m:12s left)
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  81 LG+F+R5      26944.199   OG7138_gene85	0h:50m:54s (10h:46m:49s left)
  82 DCMut+F+G4   4933.427    OG65919_gene79	0h:51m:15s (10h:42m:33s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  83 JTTDCMut+F+R4 5991.621    OG55688_gene68	0h:53m:17s (10h:59m:24s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  84 LG+F+G4      7217.267    OG72036_gene86	0h:54m:9s (11h:1m:24s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  85 LG+F+R5      11865.872   OG31092_gene35	0h:54m:53s (11h:1m:51s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
  86 LG+F+R5      21545.697   OG5486_gene65	0h:55m:1s (10h:55m:13s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  87 LG+F+R5      34688.506   OG3602_gene39	0h:55m:27s (10h:52m:9s left)
  88 JTT+F+R5     12900.541   OG30488_gene32	0h:55m:30s (10h:44m:37s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  89 LG+F+R3      3365.904    OG59959_gene70	0h:56m:52s (10h:52m:22s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  90 Dayhoff+F+R4 3464.340    OG55427_gene66	0h:57m:20s (10h:49m:56s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  91 JTTDCMut+F+R4 3376.676    OG48891_gene60	0h:57m:44s (10h:46m:39s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  92 JTTDCMut+F+R4 6330.288    OG55484_gene67	0h:58m:40s (10h:49m:19s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  93 LG+F+G4      31194.646   OG7638_gene88	0h:59m:33s (10h:51m:19s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  94 LG+F+R5      29514.687   OG4366_gene53	1h:0m:10s (10h:50m:22s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  95 LG+F+R5      20744.541   OG1606_gene10	1h:3m:4s (11h:13m:51s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  96 LG+F+R5      34354.314   OG6270_gene74	1h:4m:49s (11h:24m:43s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  97 JTT+F+R5     26615.637   OG7874_gene91	1h:6m:26s (11h:33m:52s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
  98 JTT+F+R5     10194.900   OG41228_gene49	1h:10m:50s (12h:11m:36s left)
  99 LG+F+R5      25967.109   OG8214_gene94	1h:11m:30s (12h:10m:12s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
 100 LG+F+R5      9570.141    OG30751_gene34	1h:12m:35s (12h:13m:12s left)
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
 101 LG+F+R4      41949.039   OG6111_gene72	1h:23m:35s (13h:55m:2s left)
Partition information was printed to 91taxa.best_scheme.nex
Partition information in Raxml format was printed to 91taxa.best_scheme

All model information printed to 91taxa.model
CPU time for ModelFinder: 130377.014 seconds (36h:12m:57s)
Wall-clock time for ModelFinder: 5015.765 seconds (1h:23m:35s)
Generating 1500 samples for ultrafast bootstrap (seed: 117744)...

NOTE: 1681 MB RAM (1 GB) is required!
Estimate model parameters (epsilon = 0.100)
Optimizing LG+F+R4 parameters for partition OG6111_gene72 (228 free parameters)
Optimizing LG+F+R4 parameters for partition OG4755_gene58 (214 free parameters)
Optimizing LG+F+R5 parameters for partition OG4366_gene53 (206 free parameters)
Optimizing LG+F+R5 parameters for partition OG6270_gene74 (210 free parameters)
Optimizing LG+F+R5 parameters for partition OG5486_gene65 (206 free parameters)
Optimizing LG+F+R5 parameters for partition OG7138_gene85 (210 free parameters)
Optimizing LG+F+R5 parameters for partition OG3602_gene39 (210 free parameters)
Optimizing LG+F+G4 parameters for partition OG7638_gene88 (209 free parameters)
Optimizing LG+F+G4 parameters for partition OG11343_gene1 (203 free parameters)
Optimizing JTT+F+R5 parameters for partition OG7874_gene91 (210 free parameters)
Optimizing LG+F+R4 parameters for partition OG16187_gene11 (206 free parameters)
Optimizing LG+F+R5 parameters for partition OG1606_gene10 (218 free parameters)
Optimizing LG+F+G4 parameters for partition OG20899_gene17 (211 free parameters)
Optimizing LG+F+R6 parameters for partition OG5422_gene64 (216 free parameters)
Optimizing LG+F+R5 parameters for partition OG9724_gene101 (210 free parameters)
Optimizing JTTDCMut+F+R5 parameters for partition OG15313_gene9 (218 free parameters)
Optimizing LG+F+R5 parameters for partition OG17642_gene13 (216 free parameters)
Optimizing LG+F+G4 parameters for partition OG6360_gene75 (199 free parameters)
Optimizing JTT+F+G4 parameters for partition OG7839_gene90 (207 free parameters)
Optimizing LG+F+R4 parameters for partition OG6922_gene83 (204 free parameters)
Optimizing LG+F+R5 parameters for partition OG8191_gene93 (208 free parameters)
Optimizing LG+F+R4 parameters for partition OG8384_gene97 (206 free parameters)
Optimizing LG+F+R5 parameters for partition OG20410_gene16 (206 free parameters)
Optimizing LG+F+R4 parameters for partition OG13430_gene3 (206 free parameters)
Optimizing LG+F+R5 parameters for partition OG8930_gene100 (212 free parameters)
Optimizing JTT+F+G4 parameters for partition OG27285_gene28 (215 free parameters)
Optimizing LG+F+G4 parameters for partition OG19096_gene15 (211 free parameters)
Optimizing LG+F+R5 parameters for partition OG8214_gene94 (206 free parameters)
Optimizing JTTDCMut+F+G4 parameters for partition OG13379_gene2 (211 free parameters)
Optimizing JTTDCMut+F+G4 parameters for partition OG8312_gene96 (201 free parameters)
Optimizing LG+F+R5 parameters for partition OG14378_gene7 (212 free parameters)
Optimizing LG+F+R4 parameters for partition OG14144_gene4 (206 free parameters)
Optimizing LG+F+R4 parameters for partition OG5025_gene61 (210 free parameters)
Optimizing LG+F+R4 parameters for partition OG8249_gene95 (216 free parameters)
Optimizing JTTDCMut+F+R4 parameters for partition OG16935_gene12 (210 free parameters)
Optimizing LG+F+G4 parameters for partition OG27654_gene29 (219 free parameters)
Optimizing JTT+F+G4 parameters for partition OG28720_gene30 (201 free parameters)
Optimizing LG+F+G4 parameters for partition OG21588_gene19 (205 free parameters)
Optimizing LG+F+R5 parameters for partition OG14246_gene6 (208 free parameters)
Optimizing LG+F+R3 parameters for partition OG6756_gene81 (208 free parameters)
Optimizing LG+F+G4 parameters for partition OG26897_gene27 (211 free parameters)
Optimizing JTT+F+R5 parameters for partition OG30488_gene32 (210 free parameters)
Optimizing JTT+F+R3 parameters for partition OG14765_gene8 (232 free parameters)
Optimizing LG+F+R4 parameters for partition OG23844_gene23 (208 free parameters)
Optimizing LG+F+R4 parameters for partition OG21069_gene18 (220 free parameters)
Optimizing LG+F+R5 parameters for partition OG18026_gene14 (210 free parameters)
Optimizing LG+F+G4 parameters for partition OG33416_gene37 (209 free parameters)
Optimizing LG+F+R5 parameters for partition OG34217_gene38 (210 free parameters)
Optimizing LG+F+R5 parameters for partition OG24557_gene24 (208 free parameters)
Optimizing LG+F+R5 parameters for partition OG31092_gene35 (212 free parameters)
Optimizing JTT+F+R5 parameters for partition OG41228_gene49 (206 free parameters)
Optimizing LG+F+R3 parameters for partition OG14237_gene5 (206 free parameters)
Optimizing JTTDCMut+F+R4 parameters for partition OG23070_gene21 (206 free parameters)
Optimizing LG+F+G4 parameters for partition OG33293_gene36 (207 free parameters)
Optimizing JTTDCMut+F+R4 parameters for partition OG22599_gene20 (206 free parameters)
Optimizing JTTDCMut+F+R4 parameters for partition OG39997_gene47 (204 free parameters)
Optimizing LG+F+G4 parameters for partition OG41645_gene50 (203 free parameters)
Optimizing LG+F+G4 parameters for partition OG29085_gene31 (201 free parameters)
Optimizing LG+F+G4 parameters for partition OG42741_gene52 (201 free parameters)
Optimizing LG+F+R4 parameters for partition OG23218_gene22 (218 free parameters)
Optimizing LG+F+R4 parameters for partition OG37214_gene40 (216 free parameters)
Optimizing JTT+F+G4 parameters for partition OG45115_gene55 (203 free parameters)
Optimizing LG+F+R5 parameters for partition OG30751_gene34 (208 free parameters)
Optimizing LG+F+G4 parameters for partition OG38763_gene44 (199 free parameters)
Optimizing JTTDCMut+F+R4 parameters for partition OG55484_gene67 (228 free parameters)
Optimizing LG+F+G4 parameters for partition OG26154_gene26 (207 free parameters)
Optimizing LG+F+G4 parameters for partition OG39177_gene46 (207 free parameters)
Optimizing LG+F+G4 parameters for partition OG43703_gene54 (201 free parameters)
Optimizing LG+F+R4 parameters for partition OG38447_gene43 (204 free parameters)
Optimizing LG+F+G4 parameters for partition OG45290_gene56 (227 free parameters)
Optimizing JTTDCMut+F+R3 parameters for partition OG24758_gene25 (204 free parameters)
Optimizing JTT+F+G4 parameters for partition OG69356_gene84 (207 free parameters)
Optimizing JTTDCMut+F+G4 parameters for partition OG38990_gene45 (205 free parameters)
Optimizing JTTDCMut+F+G4 parameters for partition OG30636_gene33 (205 free parameters)
Optimizing LG+F+G4 parameters for partition OG40685_gene48 (215 free parameters)
Optimizing JTTDCMut+F+R4 parameters for partition OG55688_gene68 (208 free parameters)
Optimizing LG+F+G4 parameters for partition OG62090_gene73 (225 free parameters)
Optimizing LG+F+R4 parameters for partition OG37498_gene41 (208 free parameters)
Optimizing LG+F+G4 parameters for partition OG64269_gene77 (207 free parameters)
Optimizing LG+F+G4 parameters for partition OG47996_gene59 (203 free parameters)
Optimizing LG+F+G4 parameters for partition OG72036_gene86 (205 free parameters)
Optimizing DCMut+F+G4 parameters for partition OG65919_gene79 (199 free parameters)
Optimizing JTTDCMut+F+G4 parameters for partition OG59315_gene69 (201 free parameters)
Optimizing LG+F+G4 parameters for partition OG73717_gene87 (201 free parameters)
Optimizing LG+F+G4 parameters for partition OG37854_gene42 (203 free parameters)
Optimizing LG+F+G4 parameters for partition OG77410_gene89 (201 free parameters)
Optimizing LG+F+R4 parameters for partition OG53892_gene63 (204 free parameters)
Optimizing LG+F+G4 parameters for partition OG68005_gene82 (201 free parameters)
Optimizing JTTDCMut+F+G4 parameters for partition OG79411_gene92 (201 free parameters)
Optimizing Dayhoff+F+R3 parameters for partition OG42255_gene51 (204 free parameters)
Optimizing JTTDCMut+F+G4 parameters for partition OG45588_gene57 (201 free parameters)
Optimizing JTTDCMut+F+G4 parameters for partition OG65446_gene78 (203 free parameters)
Optimizing LG+F+R4 parameters for partition OG83862_gene98 (204 free parameters)
Optimizing JTTDCMut+F+R4 parameters for partition OG48891_gene60 (204 free parameters)
Optimizing LG+F+R3 parameters for partition OG59959_gene70 (208 free parameters)
Optimizing JTTDCMut+F+R4 parameters for partition OG67255_gene80 (204 free parameters)
Optimizing Dayhoff+F+R4 parameters for partition OG55427_gene66 (222 free parameters)
Optimizing LG+F+R3 parameters for partition OG52393_gene62 (204 free parameters)
Optimizing Dayhoff+F+G4 parameters for partition OG60357_gene71 (201 free parameters)
Optimizing VT+F parameters for partition OG64051_gene76 (200 free parameters)
Optimizing JTTDCMut+F+R2 parameters for partition OG85403_gene99 (222 free parameters)

WARNING: Estimated model parameters are at boundary that can cause numerical instability!

Computing ML distances based on estimated model parameters... 779.513 sec
Computing BIONJ tree...
0.184 seconds
Log-likelihood of BIONJ tree: -603380.719
--------------------------------------------------------------------
|             INITIALIZING CANDIDATE TREE SET                      |
--------------------------------------------------------------------
Generating 8 parsimony trees... 29.420 second
Computing log-likelihood of 8 initial trees ... 19.313 seconds
Current best score: -602587.145

Do NNI search on 10 best initial trees
Estimate model parameters (epsilon = 0.100)

WARNING: Estimated model parameters are at boundary that can cause numerical instability!

BETTER TREE FOUND at iteration 1: -602473.710
Iteration 10 / LogL: -602503.094 / Time: 1h:32m:18s
Finish initializing candidate tree set (8)
Current best tree score: -602473.710 / CPU time: 210.002
Number of iterations: 10
--------------------------------------------------------------------
|               OPTIMIZING CANDIDATE TREE SET                      |
--------------------------------------------------------------------
Iteration 20 / LogL: -602517.221 / Time: 1h:36m:52s
Iteration 30 / LogL: -602707.326 / Time: 1h:41m:19s (0h:43m:23s left)
Iteration 40 / LogL: -602547.234 / Time: 1h:45m:53s (0h:34m:52s left)
Iteration 50 / LogL: -602600.022 / Time: 1h:50m:23s (0h:27m:53s left)
Log-likelihood cutoff on original alignment: -602654.491
Iteration 60 / LogL: -602574.614 / Time: 1h:55m:8s (0h:21m:55s left)
Iteration 70 / LogL: -602583.342 / Time: 1h:59m:27s (0h:16m:6s left)
Estimate model parameters (epsilon = 0.100)

WARNING: Estimated model parameters are at boundary that can cause numerical instability!

BETTER TREE FOUND at iteration 72: -602426.287
Iteration 80 / LogL: -602608.986 / Time: 2h:4m:43s (0h:47m:53s left)
Iteration 90 / LogL: -602525.046 / Time: 2h:9m:5s (0h:41m:55s left)
Iteration 100 / LogL: -602485.704 / Time: 2h:13m:29s (0h:36m:17s left)
Log-likelihood cutoff on original alignment: -602654.491
NOTE: Bootstrap correlation coefficient of split occurrence frequencies: 0.991
Iteration 110 / LogL: -602562.754 / Time: 2h:17m:56s (0h:44m:52s left)
Iteration 120 / LogL: -602662.217 / Time: 2h:22m:18s (0h:39m:28s left)
Iteration 130 / LogL: -602550.382 / Time: 2h:26m:40s (0h:34m:13s left)
Iteration 140 / LogL: -602580.768 / Time: 2h:31m:12s (0h:29m:11s left)
Iteration 150 / LogL: -602665.203 / Time: 2h:35m:35s (0h:24m:9s left)
Log-likelihood cutoff on original alignment: -602634.770
Iteration 160 / LogL: -602711.672 / Time: 2h:39m:51s (0h:19m:11s left)
Iteration 170 / LogL: -602494.679 / Time: 2h:44m:15s (0h:14m:19s left)
Total number of trees received: 0
Total number of trees sent: 0
Total number of NNI searches done by myself: 173
TREE SEARCH COMPLETED AFTER 173 ITERATIONS / Time: 2h:45m:35s

--------------------------------------------------------------------
|                    FINALIZING TREE SEARCH                        |
--------------------------------------------------------------------
Performs final model parameters optimization
Estimate model parameters (epsilon = 0.010)
Optimizing LG+F+R4 parameters for partition OG6111_gene72 (228 free parameters)
Optimizing LG+F+R5 parameters for partition OG3602_gene39 (210 free parameters)
Optimizing LG+F+R5 parameters for partition OG8214_gene94 (206 free parameters)
Optimizing JTTDCMut+F+G4 parameters for partition OG8312_gene96 (201 free parameters)
Optimizing LG+F+R5 parameters for partition OG8930_gene100 (212 free parameters)
Optimizing JTT+F+R5 parameters for partition OG7874_gene91 (210 free parameters)
Optimizing LG+F+R4 parameters for partition OG4755_gene58 (214 free parameters)
Optimizing LG+F+G4 parameters for partition OG20899_gene17 (211 free parameters)
Optimizing JTT+F+G4 parameters for partition OG28720_gene30 (201 free parameters)
Optimizing JTTDCMut+F+R4 parameters for partition OG16935_gene12 (210 free parameters)
Optimizing LG+F+G4 parameters for partition OG7638_gene88 (209 free parameters)
Optimizing LG+F+R4 parameters for partition OG14144_gene4 (206 free parameters)
Optimizing LG+F+R4 parameters for partition OG6922_gene83 (204 free parameters)
Optimizing LG+F+G4 parameters for partition OG11343_gene1 (203 free parameters)
Optimizing LG+F+R5 parameters for partition OG14378_gene7 (212 free parameters)
Optimizing LG+F+R4 parameters for partition OG8384_gene97 (206 free parameters)
Optimizing LG+F+R4 parameters for partition OG5025_gene61 (210 free parameters)
Optimizing LG+F+R5 parameters for partition OG7138_gene85 (210 free parameters)
Optimizing JTT+F+G4 parameters for partition OG27285_gene28 (215 free parameters)
Optimizing LG+F+R5 parameters for partition OG8191_gene93 (208 free parameters)
Optimizing LG+F+R6 parameters for partition OG5422_gene64 (216 free parameters)
Optimizing JTTDCMut+F+G4 parameters for partition OG13379_gene2 (211 free parameters)
Optimizing LG+F+R5 parameters for partition OG20410_gene16 (206 free parameters)
Optimizing LG+F+R5 parameters for partition OG5486_gene65 (206 free parameters)
Optimizing LG+F+R4 parameters for partition OG16187_gene11 (206 free parameters)
Optimizing LG+F+G4 parameters for partition OG19096_gene15 (211 free parameters)
Optimizing LG+F+G4 parameters for partition OG27654_gene29 (219 free parameters)
Optimizing LG+F+R5 parameters for partition OG17642_gene13 (216 free parameters)
Optimizing LG+F+R5 parameters for partition OG9724_gene101 (210 free parameters)
Optimizing LG+F+R4 parameters for partition OG13430_gene3 (206 free parameters)
Optimizing LG+F+G4 parameters for partition OG21588_gene19 (205 free parameters)
Optimizing LG+F+R4 parameters for partition OG8249_gene95 (216 free parameters)
Optimizing LG+F+R5 parameters for partition OG4366_gene53 (206 free parameters)
Optimizing JTT+F+G4 parameters for partition OG7839_gene90 (207 free parameters)
Optimizing LG+F+R5 parameters for partition OG6270_gene74 (210 free parameters)
Optimizing LG+F+R5 parameters for partition OG1606_gene10 (218 free parameters)
Optimizing JTTDCMut+F+R5 parameters for partition OG15313_gene9 (218 free parameters)
Optimizing LG+F+R3 parameters for partition OG6756_gene81 (208 free parameters)
Optimizing LG+F+G4 parameters for partition OG6360_gene75 (199 free parameters)
Optimizing LG+F+R5 parameters for partition OG14246_gene6 (208 free parameters)
Optimizing LG+F+G4 parameters for partition OG26897_gene27 (211 free parameters)
Optimizing JTT+F+R5 parameters for partition OG30488_gene32 (210 free parameters)
Optimizing JTT+F+R3 parameters for partition OG14765_gene8 (232 free parameters)
Optimizing LG+F+R4 parameters for partition OG23844_gene23 (208 free parameters)
Optimizing LG+F+R4 parameters for partition OG21069_gene18 (220 free parameters)
Optimizing LG+F+R5 parameters for partition OG18026_gene14 (210 free parameters)
Optimizing LG+F+G4 parameters for partition OG33416_gene37 (209 free parameters)
Optimizing LG+F+R5 parameters for partition OG34217_gene38 (210 free parameters)
Optimizing LG+F+R5 parameters for partition OG24557_gene24 (208 free parameters)
Optimizing LG+F+R5 parameters for partition OG31092_gene35 (212 free parameters)
Optimizing JTT+F+R5 parameters for partition OG41228_gene49 (206 free parameters)
Optimizing LG+F+R3 parameters for partition OG14237_gene5 (206 free parameters)
Optimizing JTTDCMut+F+R4 parameters for partition OG23070_gene21 (206 free parameters)
Optimizing LG+F+G4 parameters for partition OG33293_gene36 (207 free parameters)
Optimizing JTTDCMut+F+R4 parameters for partition OG22599_gene20 (206 free parameters)
Optimizing JTTDCMut+F+R4 parameters for partition OG39997_gene47 (204 free parameters)
Optimizing LG+F+G4 parameters for partition OG41645_gene50 (203 free parameters)
Optimizing LG+F+G4 parameters for partition OG29085_gene31 (201 free parameters)
Optimizing LG+F+G4 parameters for partition OG42741_gene52 (201 free parameters)
Optimizing LG+F+R4 parameters for partition OG23218_gene22 (218 free parameters)
Optimizing LG+F+R4 parameters for partition OG37214_gene40 (216 free parameters)
Optimizing JTT+F+G4 parameters for partition OG45115_gene55 (203 free parameters)
Optimizing LG+F+R5 parameters for partition OG30751_gene34 (208 free parameters)
Optimizing LG+F+G4 parameters for partition OG38763_gene44 (199 free parameters)
Optimizing JTTDCMut+F+R4 parameters for partition OG55484_gene67 (228 free parameters)
Optimizing LG+F+G4 parameters for partition OG26154_gene26 (207 free parameters)
Optimizing LG+F+G4 parameters for partition OG39177_gene46 (207 free parameters)
Optimizing LG+F+G4 parameters for partition OG43703_gene54 (201 free parameters)
Optimizing LG+F+R4 parameters for partition OG38447_gene43 (204 free parameters)
Optimizing LG+F+G4 parameters for partition OG45290_gene56 (227 free parameters)
Optimizing JTTDCMut+F+R3 parameters for partition OG24758_gene25 (204 free parameters)
Optimizing JTT+F+G4 parameters for partition OG69356_gene84 (207 free parameters)
Optimizing JTTDCMut+F+G4 parameters for partition OG38990_gene45 (205 free parameters)
Optimizing JTTDCMut+F+G4 parameters for partition OG30636_gene33 (205 free parameters)
Optimizing LG+F+G4 parameters for partition OG40685_gene48 (215 free parameters)
Optimizing JTTDCMut+F+R4 parameters for partition OG55688_gene68 (208 free parameters)
Optimizing LG+F+G4 parameters for partition OG62090_gene73 (225 free parameters)
Optimizing LG+F+R4 parameters for partition OG37498_gene41 (208 free parameters)
Optimizing LG+F+G4 parameters for partition OG64269_gene77 (207 free parameters)
Optimizing LG+F+G4 parameters for partition OG47996_gene59 (203 free parameters)
Optimizing LG+F+G4 parameters for partition OG72036_gene86 (205 free parameters)
Optimizing DCMut+F+G4 parameters for partition OG65919_gene79 (199 free parameters)
Optimizing JTTDCMut+F+G4 parameters for partition OG59315_gene69 (201 free parameters)
Optimizing LG+F+G4 parameters for partition OG73717_gene87 (201 free parameters)
Optimizing LG+F+G4 parameters for partition OG37854_gene42 (203 free parameters)
Optimizing LG+F+G4 parameters for partition OG77410_gene89 (201 free parameters)
Optimizing LG+F+R4 parameters for partition OG53892_gene63 (204 free parameters)
Optimizing LG+F+G4 parameters for partition OG68005_gene82 (201 free parameters)
Optimizing JTTDCMut+F+G4 parameters for partition OG79411_gene92 (201 free parameters)
Optimizing Dayhoff+F+R3 parameters for partition OG42255_gene51 (204 free parameters)
Optimizing JTTDCMut+F+G4 parameters for partition OG45588_gene57 (201 free parameters)
Optimizing JTTDCMut+F+G4 parameters for partition OG65446_gene78 (203 free parameters)
Optimizing LG+F+R4 parameters for partition OG83862_gene98 (204 free parameters)
Optimizing JTTDCMut+F+R4 parameters for partition OG48891_gene60 (204 free parameters)
Optimizing LG+F+R3 parameters for partition OG59959_gene70 (208 free parameters)
Optimizing JTTDCMut+F+R4 parameters for partition OG67255_gene80 (204 free parameters)
Optimizing Dayhoff+F+R4 parameters for partition OG55427_gene66 (222 free parameters)
Optimizing LG+F+R3 parameters for partition OG52393_gene62 (204 free parameters)
Optimizing Dayhoff+F+G4 parameters for partition OG60357_gene71 (201 free parameters)
Optimizing VT+F parameters for partition OG64051_gene76 (200 free parameters)
Optimizing JTTDCMut+F+R2 parameters for partition OG85403_gene99 (222 free parameters)

WARNING: Estimated model parameters are at boundary that can cause numerical instability!

BEST SCORE FOUND : -602380.008
Creating bootstrap support values...
Split supports printed to NEXUS file 91taxa.splits.nex
Total tree length: 19.173

Total number of iterations: 173
CPU time used for tree search: 118125.004 sec (32h:48m:45s)
Wall-clock time used for tree search: 4605.298 sec (1h:16m:45s)
Total CPU time used: 253183.011 sec (70h:19m:43s)
Total wall-clock time used: 10229.439 sec (2h:50m:29s)

Computing bootstrap consensus tree...
Reading input file 91taxa.splits.nex...
114 taxa and 282 splits.
Consensus tree written to 91taxa.contree
Reading input trees file 91taxa.contree
Log-likelihood of consensus tree: -602429.343

Analysis results written to: 
  IQ-TREE report:                91taxa.iqtree
  Maximum-likelihood tree:       91taxa.treefile
  Likelihood distances:          91taxa.mldist
  Best partitioning scheme:      91taxa.best_scheme.nex
           in RAxML format:      91taxa.best_scheme

Ultrafast bootstrap approximation results written to:
  Split support values:          91taxa.splits.nex
  Consensus tree:                91taxa.contree
  Screen log file:               91taxa.log

Date and Time: Wed Dec  1 21:35:26 2021
